CDS

Accession Number TCMCG017C19777
gbkey CDS
Protein Id OMO84504.1
Location join(5705..6124,6261..7016)
GeneID InterPro:IPR001737
Organism Corchorus olitorius
locus_tag COLO4_21991

Protein

Length 391aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017842.1
Definition Ribosomal RNA adenine methylase transferase [Corchorus olitorius]
Locus_tag COLO4_21991

EGGNOG-MAPPER Annotation

COG_category A
Description Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R10716        [VIEW IN KEGG]
KEGG_rclass RC00003        [VIEW IN KEGG]
RC03257        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14191        [VIEW IN KEGG]
EC 2.1.1.183        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000179        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009116        [VIEW IN EMBL-EBI]
GO:0009119        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016433        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042278        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046085        [VIEW IN EMBL-EBI]
GO:0046128        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTCTTCTCAAGCTAAAAACAACTCCATTCTACCTTTCTGGGTTAATTTTCTTGCAAAAGTCTCTACGAAATCTCAGCACAAAATCCAGTCGTTATTCTCGCAGAGATAGTGATGAAGAAGATGATCCCAAAGACCAGAAAATTCAAAGCGCAGAAGAAAATCAACCAGACCGTTTATATCTATATAAGAGCAAAGGTCAACATCTCCTCACCAATACCCGGATTCTCGACGCTATTGTTCGAAGGTCCGACGTAAGACCTACCGACACTGTCTTAGAAATTGGACCTGGGACCGGAAATCTCACTGTCAAGCTTCTTGAAGCTGCTAAAAAGGTTGTCGCCATCGAAATCGATAAAAGAATGGTGGAAATTCTCCACAAACGCGTTGCTGATGAAGGGTTGCAAGATAAGCTTCATGTTATATGTAAAGATGCAATGAAGGCAGAGTTTCCTCAATTTGATCTTGTTGTAGCCAACATCCCATATGGGATATCTTCCCCACTTGTGGCTAAATTGGTTTATGGAGGGAACCCTTTTAGGAGTGCAACATTGCTCCTTCAAAAGGAGTTTGCGCGTCGGTTACTGGCTAAACCTGGGGACTCAGAGTTTAACAGATTGGCTGTGAATGTGAAGTTGGTGGCAGATGTAGAATTTGTCATGGATGTAAGCAAGAGGGAGTTTCTCCCTTGTCCAAAAGTCGATTCCTCTGTTGTAATAATCCGACCAAAAGTTGAAATCCCTAATGTCAATCTTGATGAGTGGTGGGCTTTCACCAGGACTTGTTTTTGCAAGAAGAATAAGACTCTAGGGGCTACGTTCAAGCAGAAGAAGAAGCTTATAGAGCTGTTGAAATTGGCCAAAGCAACAAGCTCAAATGAAGAAAATGCTCTGCTTGGCAAGAATTATGAATCTGATGTTGATTATGACAGTGAAACTGATGAAGACGTTGGTTTTGCCTCTTCTTGCTCTGATTCGGAAATGACTTTGTTCAAAGAGAAAGTTGTTGGGATTTTGAAAACAGGAGGGTTTCATGATAAGAGGCCTTCAAAGCTGTCCAATGAGGAGTTTTTATATATACTCTCCTTGTTTAATCAAGCAGGAATATATTTTCATGACCATGTAAATCCAAAAGTTTCAGATAATGTTGCTTTTGCTGCTGCTTATACTTCATAG
Protein:  
MLLLKLKTTPFYLSGLIFLQKSLRNLSTKSSRYSRRDSDEEDDPKDQKIQSAEENQPDRLYLYKSKGQHLLTNTRILDAIVRRSDVRPTDTVLEIGPGTGNLTVKLLEAAKKVVAIEIDKRMVEILHKRVADEGLQDKLHVICKDAMKAEFPQFDLVVANIPYGISSPLVAKLVYGGNPFRSATLLLQKEFARRLLAKPGDSEFNRLAVNVKLVADVEFVMDVSKREFLPCPKVDSSVVIIRPKVEIPNVNLDEWWAFTRTCFCKKNKTLGATFKQKKKLIELLKLAKATSSNEENALLGKNYESDVDYDSETDEDVGFASSCSDSEMTLFKEKVVGILKTGGFHDKRPSKLSNEEFLYILSLFNQAGIYFHDHVNPKVSDNVAFAAAYTS